Publications (113) JAVIER VARGAS BALBUENA publications

2024

  1. Cryo-EM Map Anisotropy Can Be Attenuated by Map Post-Processing and a New Method for Its Estimation

    International Journal of Molecular Sciences, Vol. 25, Núm. 7

2022

  1. Automatic whole blood cell analysis from blood smear using label-free multi-modal imaging with deep neural networks

    Analytica Chimica Acta, Vol. 1229

  2. Enhancement of Cryo-EM maps by a multiscale tubular filter

    Optics Express, Vol. 30, Núm. 3, pp. 4515-4527

  3. Erratum: Image processing tools for the validation of CryoEM maps (Faraday Discussions (2022) DOI: 10.1039/D2FD00059H)

    Faraday Discussions

  4. Hierarchical autoclassification of cryo-EM samples and macromolecular energy landscape determination

    Computer Methods and Programs in Biomedicine, Vol. 216

  5. Image processing tools for the validation of CryoEM maps

    Faraday Discussions, Vol. 240, pp. 210-227

  6. Incremental PCA algorithm for fringe pattern demodulation

    Optics Express, Vol. 30, Núm. 8, pp. 12278-12293

  7. Multivalent interactions essential for lentiviral integrase function

    Nature Communications, Vol. 13, Núm. 1

2021

  1. A two steps phase-shifting demodulation method using the VU factorization

    Optics and Lasers in Engineering, Vol. 147

  2. Advances in xmipp for cryo–electron microscopy: From xmipp to scipion

    Molecules, Vol. 26, Núm. 20

  3. DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

    Communications Biology, Vol. 4, Núm. 1

  4. ENRICH: A fast method to improve the quality of flexible macromolecular reconstructions

    Progress in Biophysics and Molecular Biology

  5. Facial morphology analysis in osteogenesis imperfecta types I, III and IV using computer vision

    Orthodontics and Craniofacial Research, Vol. 24, Núm. S2, pp. 92-99

  6. Local computational methods to improve the interpretability and analysis of cryo-EM maps

    Nature Communications, Vol. 12, Núm. 1

  7. Local methods to improve cryo-electron microcopy maps

    Optics InfoBase Conference Papers

  8. Robust weighted principal components analysis demodulation algorithm for phase-shifting interferometry

    Optics Express, Vol. 29, Núm. 11, pp. 16534-16546

2020

  1. A comprehensive review of the principal component analysis applied to the demodulation of phase-shifting interferograms

    Proceedings of SPIE - The International Society for Optical Engineering

  2. Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy

    RNA, Vol. 26, Núm. 12, pp. 2017-2030

  3. Automatic local resolution-based sharpening of cryo-EM maps

    Bioinformatics, Vol. 36, Núm. 3, pp. 765-772

  4. High strength brushite bioceramics obtained by selective regulation of crystal growth with chiral biomolecules

    Acta Biomaterialia, Vol. 106, pp. 351-359