Publikationen in Zusammenarbeit mit Forschern von Universidad Nacional de La Plata (9)

2019

  1. SWIMM 2.0: Enhanced Smith–Waterman on Intel’s Multicore and Manycore Architectures Based on AVX-512 Vector Extensions

    International Journal of Parallel Programming, Vol. 47, Núm. 2, pp. 296-316

2018

  1. OSWALD: OpenCL Smith–Waterman on Altera’s FPGA for Large Protein Databases

    International Journal of High Performance Computing Applications, Vol. 32, Núm. 3, pp. 337-350

  2. SWIFOLD: Smith-Waterman implementation on FPGA with OpenCL for long DNA sequences

    BMC Systems Biology, Vol. 12

2016

  1. State-of-the-art in smith-waterman protein database search on HPC platforms

    Big Data Analytics in Genomics (Springer International Publishing), pp. 197-223

2015

  1. ACFS: A completely fair scheduler for asymmetric single-ISA multicore systems

    Proceedings of the ACM Symposium on Applied Computing

  2. An energy-aware performance analysis of SWIMM: Smith-Waterman implementation on Intel's Multicore and Manycore architectures

    Concurrency Computation

  3. Smith-Waterman Protein Search with OpenCL on an FPGA

    Proceedings - 14th IEEE International Conference on Trust, Security and Privacy in Computing and Communications, TrustCom 2015

2014

  1. Exploring the throughput-fairness trade-off on asymmetric multicore systems

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

  2. Smith-Waterman algorithm on heterogeneous systems: A case study

    2014 IEEE International Conference on Cluster Computing, CLUSTER 2014