NCAPH drives breast cancer progression and identifies a gene signature that predicts luminal a tumour recurrence
- Mendiburu‐Eliçabe, Marina 12
- García‐Sancha, Natalia 12
- Corchado‐Cobos, Roberto 12
- Martínez‐López, Angélica 45
- Chang, Hang 89
- Hua Mao, Jian 89
- Blanco‐Gómez, Adrián 12
- García‐Casas, Ana 45
- Castellanos‐Martín, Andrés 12
- Salvador, Nélida 45
- Jiménez‐Navas, Alejandro 12
- Pérez‐Baena, Manuel Jesús 12
- Sánchez‐Martín, Manuel Adolfo 1213
- Abad‐Hernández, María Del Mar 267
- Carmen, Sofía Del 267
- Claros‐Ampuero, Juncal 1211
- Cruz‐Hernández, Juan Jesús 121112
- Rodríguez‐Sánchez, César Augusto 121112
- García‐Cenador, María Begoña 23
- García‐Criado, Francisco Javier 23
- Vicente, Rodrigo Santamaría 10
- Castillo‐Lluva, Sonia 45
- Pérez‐Losada, Jesús 12
- 1 Instituto de Biología Molecular y Celular del Cáncer (IBMCC‐CIC) Universidad de Salamanca/CSIC Salamanca Spain
- 2 Biosanitary Research Institute of Salamanca (IBSAL) Salamanca Spain
- 3 Departamento de Cirugía Universidad de Salamanca Salamanca Spain
- 4 Departamento de Bioquímica y Biología Molecular Facultad de Ciencias Químicas Universidad Complutense Madrid Spain
- 5 San Carlos Health Research Institute (IdISSC) Madrid Spain
- 6 Departamento de Anatomía Patológica Universidad de Salamanca Salamanca Spain
- 7 Servicio de Anatomía Patológica Hospital Universitario de Salamanca Salamanca Spain
- 8 Biological Systems and Engineering Division Lawrence Berkeley National Laboratory (LBNL) Berkeley California USA
- 9 Berkeley Biomedical Data Science Center Lawrence Berkeley National Laboratory (LBNL) Berkeley California USA
- 10 Departamento de Informática y Automática Universidad de Salamanca Salamanca España
- 11 Servicio de Oncología Hospital Universitario de Salamanca Salamanca Spain
- 12 Departamento de Medicina Universidad de Salamanca Salamanca Spain
- 13 Servicio de Transgénesis Plataforma Nucleus Universidad de Salamanca Salamanca Spain
ISSN: 2001-1326, 2001-1326
Año de publicación: 2024
Volumen: 14
Número: 2
Tipo: Artículo
Otras publicaciones en: Clinical and Translational Medicine
Resumen
BackgroundLuminal A tumours generally have a favourable prognosis but possess the highest 10-year recurrence risk among breast cancers. Additionally, a quarter of the recurrence cases occur within 5 years post-diagnosis. Identifying such patients is crucial as long-term relapsers could benefit from extended hormone therapy, while early relapsers might require more aggressive treatment.MethodsWe conducted a study to explore non-structural chromosome maintenance condensin I complex subunit H’s (NCAPH) role in luminal A breast cancer pathogenesis, both in vitro and in vivo, aiming to identify an intratumoural gene expression signature, with a focus on elevated NCAPH levels, as a potential marker for unfavourable progression. Our analysis included transgenic mouse models overexpressing NCAPH and a genetically diverse mouse cohort generated by backcrossing. A least absolute shrinkage and selection operator (LASSO) multivariate regression analysis was performed on transcripts associated with elevated intratumoural NCAPH levels.ResultsWe found that NCAPH contributes to adverse luminal A breast cancer progression. The intratumoural gene expression signature associated with elevated NCAPH levels emerged as a potential risk identifier. Transgenic mice overexpressing NCAPH developed breast tumours with extended latency, and in Mouse Mammary Tumor Virus (MMTV)-NCAPHErbB2 double-transgenic mice, luminal tumours showed increased aggressiveness. High intratumoural Ncaph levels correlated with worse breast cancer outcome and subpar chemotherapy response. A 10-gene risk score, termed Gene Signature for Luminal A 10 (GSLA10), was derived from the LASSO analysis, correlating with adverse luminal A breast cancer progression.ConclusionsThe GSLA10 signature outperformed the Oncotype DX signature in discerning tumours with unfavourable outcomes, previously categorised as luminal A by Prediction Analysis of Microarray 50 (PAM50) across three independent human cohorts. This new signature holds promise for identifying luminal A tumour patients with adverse prognosis, aiding in the development of personalised treatment strategies to significantly improve patient outcomes.
Información de financiación
Financiadores
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Instituto de Salud Carlos III
- PIE14/00066
Referencias bibliográficas
- 10.3322/caac.21660
- 10.1038/415530a
- 10.1093/jnci/djj329
- 10.1016/j.molonc.2007.10.004
- 10.1158/1078-0432.CCR-10-1282
- 10.1056/NEJMoa041588
- 10.1038/nrclinonc.2011.178
- 10.1007/s10549-010-1331-z
- 10.1200/JCO.2008.18.1370
- 10.1200/JCO.2010.31.6950
- 10.1001/jamaoncol.2017.5524
- 10.1186/s13058-015-0516-0
- 10.1007/s00432-018-2644-2
- 10.1093/jnci/djab202
- 10.1093/aje/kwp077
- 10.1200/JCO.2015.62.3504
- 10.1186/s13058-014-0489-4
- 10.1007/s10549-019-05446-y
- 10.1007/s10549-013-2699-3
- 10.18632/oncotarget.15562
- 10.1101/gad.194746.112
- 10.1016/S0092-8674(03)00724-4
- 10.1242/jcs.01604
- 10.1091/mbc.e04-03-0242
- 10.1016/S1534-5807(03)00092-3
- 10.1016/j.cub.2005.12.040
- 10.1101/gr.147400
- 10.1016/j.cub.2005.03.037
- 10.1016/j.cell.2016.01.033
- 10.1002/jcp.30113
- 10.1002/(SICI)1097-0258(19970228)16:4<385::AID-SIM380>3.0.CO;2-3
- 10.1038/nmeth.2019
- NguyenD Quantifying chromogen intensity in immunohistochemistry via reciprocal intensity.CancerInCytes. 2013.www.cancerincytes.org/quantifying‐chromogen‐intensity‐in‐immunohistochemistry‐#!
- 10.1073/pnas.89.22.10578
- 10.1186/s13059-015-0599-z
- 10.1038/75556
- 10.1089/omi.2011.0118
- TherneauT.A Package for Survival Analysis in R. R package version 3.4‐0. 2022.https://CRAN.R‐project.org/package=survival
- 10.1007/978-1-4757-3294-8
- KassambaraA KosinskiM BiecekP FabianS.Package ‘survminer’. Drawing Survival Curves using ‘ggplot2’ (R package version 03 1). 2017.
- 10.1371/journal.pone.0017911
- 10.1002/9781118548387
- 10.1007/978-1-4757-3462-1
- 10.1186/1471-2105-12-77
- 10.1038/nature10983
- 10.1038/nature11412
- 10.2307/2532051
- 10.1016/j.jbi.2020.103496
- CastilloS Blanco‐GómezA Pérez‐LosadaJ.Papel de la Kleisina NCAPH en el desarrollo y evolución del cáncer de mama HER2 positivo.XXXIX Congress of the Spanish Society of Biochemistry and Molecular Biology (SEBBM). 2016.
- García‐SanchaN Corchado‐CobosR Martínez‐LópezA et al.Analyzing the role of non‐SMC condensin I complex subunit H in breast cancer development and evolution.Symposium on Cancer Genomics and Epitranscriptomics: From the Bench to the Clinic. 2022.
- Riis ML, (2013), ISRN Oncol, 2013
- 10.1186/bcr1325
- 10.1016/S0140-6736(05)17947-1
- 10.1158/0008-5472.CAN-05-4414
- 10.1056/NEJMoa021967
- 10.1016/j.neo.2022.01.001
- 10.1210/mend-2-2-143
- Jezequel P, (2021), Database, pp. 2021
- 10.2196/27633
- Bastien RR, (2012), BMC Med Genet, 5, pp. 44
- 10.1016/j.breast.2016.07.016
- 10.1158/0008-5472.CAN-18-1669
- 10.1016/j.freeradbiomed.2018.03.012
- 10.1038/nature01434
- 10.1016/j.cell.2018.03.035
- 10.1016/S0092-8674(02)00622-0
- 10.1038/nature03155
- 10.1046/j.1600-6143.2003.00324.x
- 10.1038/nature07683
- 10.1016/j.critrevonc.2016.01.021
- 10.1093/annonc/mdz173
- 10.1371/journal.pone.0168730
- 10.1186/s12957-020-02089-y
- 10.1056/NEJMoa1804710
- 10.1200/JCO.2005.04.7985
- 10.1200/JCO.22.02570
- 10.1056/NEJMoa1701830
- 10.1016/S0140-6736(12)61963-1
- 10.1056/NEJMoa1604700
- 10.1016/j.molcel.2015.06.002
- Zhan SJ, (2018), Oncol Rep, 39, pp. 2653
- 10.1186/s12938-021-00919-y
- 10.1111/ahg.12398
- Cui F, (2019), Oncol Lett, 17, pp. 5768
- 10.1111/iju.13911
- 10.1038/s41419-020-03244-9
- 10.1007/s11010-020-03721-x
- 10.3390/jcm9010072
- 10.1038/cddis.2017.88
- 10.1080/15384101.2021.2021050
- 10.4149/neo_2021_210607N761
- 10.1002/mc.23114
- 10.1002/jcp.28839
- 10.21037/tcr-20-2217
- Li Z, (2019), Oncol Lett, 18, pp. 4429
- 10.1371/journal.pone.0000594
- 10.1148/radiol.2021210367
- 10.1038/nrc1044
- 10.1038/aps.2017.198
- 10.1016/j.cub.2014.04.012
- 10.1016/j.ccr.2006.11.025
- 10.1038/nature03098
- 10.1016/j.ccr.2008.10.018
- Larsson L‐G, (2011), Seminars in Cancer Biology
- 10.1007/s10549-015-3370-y
- 10.1158/0008-5472.CAN-15-1927
- 10.1038/npjbcancer.2016.32