JOSUÉ
GÓMEZ BLANCO
Profesor visitante
Centro Nacional de Biotecnología
Madrid, EspañaCentro Nacional de Biotecnología -ko ikertzaileekin lankidetzan egindako argitalpenak (24)
2021
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DeepEMhancer: a deep learning solution for cryo-EM volume post-processing
Communications Biology, Vol. 4, Núm. 1
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Local computational methods to improve the interpretability and analysis of cryo-EM maps
Nature Communications, Vol. 12, Núm. 1
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Localized reconstruction in Scipion expedites the analysis of symmetry mismatches in cryo-EM data
Progress in Biophysics and Molecular Biology, Vol. 160, pp. 43-52
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Near-atomic structure of an atadenovirus reveals a conserved capsid-binding motif and intergenera variations in cementing proteins
Science Advances, Vol. 7, Núm. 14
2018
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Blind estimation of DED camera gain in Electron Microscopy
Journal of Structural Biology, Vol. 203, Núm. 2, pp. 90-93
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MonoRes: Automatic and Accurate Estimation of Local Resolution for Electron Microscopy Maps
Structure, Vol. 26, Núm. 2, pp. 337-344.e4
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Using Scipion for stream image processing at Cryo-EM facilities
Journal of Structural Biology, Vol. 204, Núm. 3, pp. 457-463
2017
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A Survey of the Use of Iterative Reconstruction Algorithms in Electron Microscopy
BioMed Research International, Vol. 2017
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A review of resolution measures and related aspects in 3D Electron Microscopy
Progress in Biophysics and Molecular Biology, Vol. 124, pp. 1-30
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Acquisition of functions on the outer capsid surface during evolution of double-stranded RNA fungal viruses
PLoS Pathogens, Vol. 13, Núm. 12
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Quantitative analysis of 3D alignment quality: Its impact on soft-validation, particle pruning and homogeneity analysis
Scientific Reports, Vol. 7, Núm. 1
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ScipionCloud: An integrative and interactive gateway for large scale cryo electron microscopy image processing on commercial and academic clouds
Journal of Structural Biology, Vol. 200, Núm. 1, pp. 20-27
2016
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Denoising of high-resolution single-particle electron-microscopy density maps by their approximation using three-dimensional Gaussian functions
Journal of Structural Biology, Vol. 194, Núm. 3, pp. 423-433
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Fast and automatic identification of particle tilt pairs based on Delaunay triangulation
Journal of Structural Biology, Vol. 196, Núm. 3, pp. 525-533
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Foil-hole and data image quality assessment in 3DEM: Towards high-throughput image acquisition in the electron microscope
Journal of Structural Biology, Vol. 196, Núm. 3, pp. 515-524
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Heterodimers as the structural unit of the T=1 capsid of the fungal double-stranded RNA Rosellinia necatrix quadrivirus 1
Journal of Virology, Vol. 90, Núm. 24, pp. 11220-11230
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Local analysis of strains and rotations for macromolecular electron microscopy maps
Journal of Structural Biology, Vol. 195, Núm. 1, pp. 123-128
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Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy
Journal of Structural Biology, Vol. 195, Núm. 1, pp. 93-99
2015
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Structural and functional insights into Escherichia coli α2 -macroglobulin endopeptidase snap-trap inhibition
Proceedings of the National Academy of Sciences of the United States of America, Vol. 112, Núm. 27, pp. 8290-8295
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Structural basis for the development of avian virus capsids that display influenza virus proteins and induce protective immunity
Journal of Virology, Vol. 89, Núm. 5, pp. 2563-2574