Publicaciones en colaboración con investigadores/as de Centro Nacional de Biotecnología (24)

2021

  1. DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

    Communications Biology, Vol. 4, Núm. 1

  2. Local computational methods to improve the interpretability and analysis of cryo-EM maps

    Nature Communications, Vol. 12, Núm. 1

  3. Localized reconstruction in Scipion expedites the analysis of symmetry mismatches in cryo-EM data

    Progress in Biophysics and Molecular Biology, Vol. 160, pp. 43-52

  4. Near-atomic structure of an atadenovirus reveals a conserved capsid-binding motif and intergenera variations in cementing proteins

    Science Advances, Vol. 7, Núm. 14

2018

  1. Blind estimation of DED camera gain in Electron Microscopy

    Journal of Structural Biology, Vol. 203, Núm. 2, pp. 90-93

  2. MonoRes: Automatic and Accurate Estimation of Local Resolution for Electron Microscopy Maps

    Structure, Vol. 26, Núm. 2, pp. 337-344.e4

  3. Using Scipion for stream image processing at Cryo-EM facilities

    Journal of Structural Biology, Vol. 204, Núm. 3, pp. 457-463

2017

  1. A Survey of the Use of Iterative Reconstruction Algorithms in Electron Microscopy

    BioMed Research International, Vol. 2017

  2. A review of resolution measures and related aspects in 3D Electron Microscopy

    Progress in Biophysics and Molecular Biology, Vol. 124, pp. 1-30

  3. Acquisition of functions on the outer capsid surface during evolution of double-stranded RNA fungal viruses

    PLoS Pathogens, Vol. 13, Núm. 12

  4. Quantitative analysis of 3D alignment quality: Its impact on soft-validation, particle pruning and homogeneity analysis

    Scientific Reports, Vol. 7, Núm. 1

  5. ScipionCloud: An integrative and interactive gateway for large scale cryo electron microscopy image processing on commercial and academic clouds

    Journal of Structural Biology, Vol. 200, Núm. 1, pp. 20-27

2016

  1. Denoising of high-resolution single-particle electron-microscopy density maps by their approximation using three-dimensional Gaussian functions

    Journal of Structural Biology, Vol. 194, Núm. 3, pp. 423-433

  2. Fast and automatic identification of particle tilt pairs based on Delaunay triangulation

    Journal of Structural Biology, Vol. 196, Núm. 3, pp. 525-533

  3. Foil-hole and data image quality assessment in 3DEM: Towards high-throughput image acquisition in the electron microscope

    Journal of Structural Biology, Vol. 196, Núm. 3, pp. 515-524

  4. Heterodimers as the structural unit of the T=1 capsid of the fungal double-stranded RNA Rosellinia necatrix quadrivirus 1

    Journal of Virology, Vol. 90, Núm. 24, pp. 11220-11230

  5. Local analysis of strains and rotations for macromolecular electron microscopy maps

    Journal of Structural Biology, Vol. 195, Núm. 1, pp. 123-128

  6. Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy

    Journal of Structural Biology, Vol. 195, Núm. 1, pp. 93-99

2015

  1. Structural and functional insights into Escherichia coli α2 -macroglobulin endopeptidase snap-trap inhibition

    Proceedings of the National Academy of Sciences of the United States of America, Vol. 112, Núm. 27, pp. 8290-8295

  2. Structural basis for the development of avian virus capsids that display influenza virus proteins and induce protective immunity

    Journal of Virology, Vol. 89, Núm. 5, pp. 2563-2574